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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs149459707 chr2:67489993 AATAT/A 1.36E-7 503 37.47 36.9 2.03 KM Plot
KIRC rs149809700 chr11:34784749 A/G 9.88E-8 503 37.6 33.35 3.3 KM Plot
KIRC rs150042854 chr16:2956969 T/C 3.7E-7 498 37.03 38.42 3.37 KM Plot
KIRC rs150088944 chr6:28276551 GGGTTT/G 8.92E-5 503 37.5 33.43 9.52 KM Plot
KIRC rs1502497 chr12:21199434 A/C 0 504 1.4 30.98 37.67 KM Plot
KIRC rs150329133 chr21:47916823 AC/A 3.33E-5 503 37.42 39.87 6.87 KM Plot
KIRC rs150357349 chr16:2940254 T/G 1.6E-5 502 36.12 44.3 3.37 KM Plot
KIRC rs150359083 chr11:34775367 AC/A 9.38E-8 505 37.73 26.57 3.3 KM Plot
KIRC rs150410687 chr16:2960105 T/C 1.57E-5 501 37.03 38.42 9.37 KM Plot
KIRC rs150629212 chr15:24346304 A/C 2.77E-8 493 37.5 32.7 3.3 KM Plot
KIRC rs150844750 chr2:109359283 T/C 2.23E-12 504 37.77 25.78 2.3 KM Plot
KIRC rs151082525 chr4:107880208 T/TACTC 4.18E-11 507 37.73 33.43 5.53 KM Plot
KIRC rs151096924 chr11:1502943 AGCAGGGGCAGGG/A 8.43E-5 507 5.47 37.53 37.33 KM Plot
KIRC rs152458 chr16:23577267 C/A 6.31E-10 503 37.53 34.87 2.43 KM Plot
KIRC rs1534575 chr11:1497223 T/C 8.08E-5 509 5.47 37.53 37.33 KM Plot